Package: coreval 0.3.0.9000


Hrach Gevorgyan
coreval: Check Clinical Trial Data Against 'CDISC' Open Rules
Finds conformance problems in clinical trial data without leaving R, using the openly published 'CDISC' Open Rules ('CORE'). Check a single dataset while you are still writing the code that builds it, or a whole study folder once it exists, and get the findings back as a tidy data frame pointing at the exact row and variable. Reads transport ('XPT'), 'SAS', comma-separated and 'Dataset-JSON' files, plus 'Define-XML' when present, and 'USDM' study-design documents. Covers rules for the 'SDTM', 'SEND', 'TIG' and 'USDM' standards. The rules are bundled inside the package, so nothing is downloaded and your data never leaves your machine: no internet, no API key, no account. When a rule cannot be checked - because it needs a dataset you did not supply, for instance - it is reported as skipped with the reason, never counted as a pass. Meant as a quick first pass before a qualified validation system, never as a replacement for one. An independent project: not affiliated with or endorsed by 'CDISC', and not a 'CORE'-certified conformance engine.
Authors:
coreval_0.3.0.9000.tar.gz
coreval_0.3.0.9000.zip(r-4.7-any)coreval_0.3.0.9000.zip(r-4.6-any)coreval_0.3.0.9000.zip(r-4.5-any)
coreval_0.3.0.9000.tgz(r-4.6-any)coreval_0.3.0.9000.tgz(r-4.5-any)
coreval_0.3.0.9000.tar.gz(r-4.7-any)coreval_0.3.0.9000.tar.gz(r-4.6-any)
coreval_0.3.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
coreval/json (API)
| # Install 'coreval' in R: |
| install.packages('coreval', repos = c('https://hrach-gevorgyan.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/hrach-gevorgyan/coreval/issues
Pkgdown/docs site:https://hrach-gevorgyan.github.io
Last updated from:0cc0a0d1f3. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 133 | ||
| source / vignettes | OK | 193 | ||
| linux-release | OK | 213 | ||
| macos-release | OK | 177 | ||
| macos-oldrel | OK | 166 | ||
| windows-devel | OK | 158 | ||
| windows-release | OK | 128 | ||
| windows-oldrel | OK | 161 | ||
| wasm-release | OK | 99 |
Exports:check_datasetcheck_studyfilter_findingslist_ct_packageslist_rulesread_studywrite_findings
Dependencies:bitbit64clicliprcpp11crayondata.tableforcatsgluehavenhmslifecyclemagrittrpillarpkgconfigprettyunitsprogressR6readrrlangtibbletidyselecttzdbutf8vctrsvroomwithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Check one dataset, without needing a study folder | check_dataset |
| Check a whole study against CDISC Open Rules | check_study |
| Narrow a result to the findings you care about | filter_findings |
| Controlled Terminology packages coreval bundles | list_ct_packages |
| Look up CORE rules | list_rules |
| Print a coreval check result as a readable report | print.coreval_result |
| Read a study into coreval's internal representation | read_study |
| Summarize a check result in a few lines | summary.coreval_result |
| Write conformance findings to a file | write_findings |